An Explainable Geometric-Weighted Graph Attention Network for Identifying Functional Networks Associated with Gait Impairment.

TitleAn Explainable Geometric-Weighted Graph Attention Network for Identifying Functional Networks Associated with Gait Impairment.
Publication TypeJournal Article
Year of Publication2023
AuthorsNerrise F, Zhao Q, Poston KL, Pohl KM, Adeli E
JournalMed Image Comput Comput Assist Interv
Volume14221
Pagination723-733
Date Published2023 Oct
Abstract

One of the hallmark symptoms of Parkinson's Disease (PD) is the progressive loss of postural reflexes, which eventually leads to gait difficulties and balance problems. Identifying disruptions in brain function associated with gait impairment could be crucial in better understanding PD motor progression, thus advancing the development of more effective and personalized therapeutics. In this work, we present an explainable, geometric, weighted-graph attention neural network (xGW-GAT) to identify functional networks predictive of the progression of gait difficulties in individuals with PD. xGW-GAT predicts the multi-class gait impairment on the MDS-Unified PD Rating Scale (MDS-UPDRS). Our computational- and data-efficient model represents functional connectomes as symmetric positive definite (SPD) matrices on a Riemannian manifold to explicitly encode pairwise interactions of entire connectomes, based on which we learn an attention mask yielding individual- and group-level explainability. Applied to our resting-state functional MRI (rs-fMRI) dataset of individuals with PD, xGW-GAT identifies functional connectivity patterns associated with gait impairment in PD and offers interpretable explanations of functional subnetworks associated with motor impairment. Our model successfully outperforms several existing methods while simultaneously revealing clinically-relevant connectivity patterns. The source code is available at https://github.com/favour-nerrise/xGW-GAT.

DOI10.1007/978-3-031-43895-0_68
Alternate JournalMed Image Comput Comput Assist Interv
PubMed ID37982132
PubMed Central IDPMC10657737
Grant ListP30 AG066515 / AG / NIA NIH HHS / United States
R01 AA010723 / AA / NIAAA NIH HHS / United States
R01 NS115114 / NS / NINDS NIH HHS / United States
R37 AA010723 / AA / NIAAA NIH HHS / United States

Weill Cornell Medicine
Department of Radiology
525 East 68th Street New York, NY 10065